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Copyright © Alexander T. Xue. All rights reserved.

Xander Xue

Simons Center for Quantitative Biology

Cold Spring Harbor Laboratory

One Bungtown Road

Cold Spring Harbor, NY 11724

xanderxue at gmail dot com

Software/Scripts


Multi-DICE(Multiple Taxa Demographic Inference of Congruency in Events) - R package for constructing hierarchical co-demographic models and simulating multitaxa summary statistic vectors

  • LINK to github: R package and documentation (including a full manual and an abbreviated R manual)


partialS/HIC(partial sweep Soft/Hard Inference through Classification) - Python software for detecting selective sweeps, including partial hard sweeps and partial soft sweeps

  • LINK to github: Python scripts with bash wrapper scripts and "README" file




Convert National Genographic raw data for use on GEDmatch - InstructionsScript, and Supporting File



Unless otherwise stated, all work here is under the GPL-3 license. Specifically, software/scripts are free to use/modify, though credit must be given to original author, and there is no warranty.